[ defaults ] ; nbfunc comb-rule gen-pairs fudgeLJ fudgeQQ 1 3 no 1.0 0.0 [ atomtypes ] ; name mass charge ptype c6 c12 C1 12.01100 0.0 A 0.35000 0.27612 C2 12.01100 0.0 A 0.35000 0.27612 H1 1.00790 0.0 A 0.25000 0.12555 H2 1.00790 0.0 A 0.25000 0.12555 [ moleculetype ] ; Name nrexcl but 3 [ atoms ] ; nr type resnr residue atom cgnr charge mass 1 C1 1 but C1 1 0.0000 12.0110 2 C2 1 but C2 2 0.0000 12.0110 3 C2 1 but C2 3 0.0000 12.0110 4 C1 1 but C1 4 0.0000 12.0110 5 H1 1 but H1 5 0.0000 1.0079 6 H1 1 but H1 6 0.0000 1.0079 7 H1 1 but H1 7 0.0000 1.0079 8 H2 1 but H2 8 0.0000 1.0079 9 H2 1 but H2 9 0.0000 1.0079 10 H2 1 but H2 10 0.0000 1.0079 11 H2 1 but H2 11 0.0000 1.0079 12 H1 1 but H1 12 0.0000 1.0079 13 H1 1 but H1 13 0.0000 1.0079 14 H1 1 but H1 14 0.0000 1.0079 [ bonds ] ; ai aj type r0 kr [ angles ] ; ai aj ak type theta0 kt [ dihedrals ] ; ai aj ak al type gamma kd [ system ] ; Name Butane [ molecules ] ; Compound #mols but 1